Interface AnalysisRepository

  • All Superinterfaces:
    org.springframework.data.repository.CrudRepository<Analysis,​java.lang.Long>, IridaJpaRepository<Analysis,​java.lang.Long>, org.springframework.data.jpa.repository.JpaSpecificationExecutor<Analysis>, org.springframework.data.repository.PagingAndSortingRepository<Analysis,​java.lang.Long>, org.springframework.data.repository.Repository<Analysis,​java.lang.Long>, org.springframework.data.repository.history.RevisionRepository<Analysis,​java.lang.Long,​java.lang.Integer>

    public interface AnalysisRepository
    extends IridaJpaRepository<Analysis,​java.lang.Long>
    A custom repository for managing Analysis objects.
    • Method Summary

      All Methods Instance Methods Abstract Methods 
      Modifier and Type Method Description
      AnalysisFastQC findFastqcAnalysisForSequenceFile​(SequenceFile sequenceFile)
      Get the fastqc analysis for a specific file.
      • Methods inherited from interface org.springframework.data.repository.CrudRepository

        count, delete, deleteAll, deleteAll, deleteAllById, deleteById, existsById, findAll, findAllById, findById, save, saveAll
      • Methods inherited from interface org.springframework.data.jpa.repository.JpaSpecificationExecutor

        count, exists, findAll, findAll, findAll, findOne
      • Methods inherited from interface org.springframework.data.repository.PagingAndSortingRepository

        findAll, findAll
      • Methods inherited from interface org.springframework.data.repository.history.RevisionRepository

        findLastChangeRevision, findRevision, findRevisions, findRevisions
    • Method Detail

      • findFastqcAnalysisForSequenceFile

        @Query("select f.fastqcAnalysis from SequenceFile f where f = ?1")
        AnalysisFastQC findFastqcAnalysisForSequenceFile​(SequenceFile sequenceFile)
        Get the fastqc analysis for a specific file.
        Parameters:
        sequenceFile - the file to load the fastqc analysis for
        Returns:
        the fastqc analysis for the file.