- AbsoluteToRelativePaths
- AbstractAnalysisSubmission
- AbstractExportModel
- ActivitiesAjaxController
- Activity
- ActivityItem
- ActivityType
- AddSampleMetadataRequest
- AddSampleMetadataResponse
- AddToCartRequest
- AdminBaseController
- AdminStatisticsAjaxController
- AdminUsersTableRequest
- AgGridColumn
- AjaxCreateItemSuccessResponse
- AjaxErrorResponse
- AjaxFormErrorResponse
- AjaxItemNotFoundException
- AjaxResponse
- AjaxSuccessResponse
- AjaxUpdateItemSuccessResponse
- AnalysesFilters
- AnalysesListRequest
- AnalysesOutputsAjaxController
- AnalysesTableAjaxController
- Analysis
- AnalysisAjaxController
- AnalysisAlreadySetException
- AnalysisAudit
- AnalysisCleanedState
- AnalysisCollectionServiceGalaxy
- AnalysisController
- AnalysisDetails
- AnalysisEmailPipelineResult
- AnalysisExecutionScheduledTask
- AnalysisExecutionScheduledTaskImpl
- AnalysisExecutionService
- AnalysisExecutionServiceAspect
- AnalysisExecutionServiceConfig
- AnalysisExecutionServiceGalaxy
- AnalysisExecutionServiceGalaxyAsync
- AnalysisExecutionServiceGalaxyCleanupAsync
- AnalysisFastQC
- AnalysisFastQC.AnalysisFastQCBuilder
- AnalysisInfo
- AnalysisInputFiles
- AnalysisJobError
- AnalysisModel
- AnalysisOutputFile
- AnalysisOutputFileDownloadManager
- AnalysisOutputFileInfo
- AnalysisOutputFileRepository
- AnalysisOutputFileRepositoryImpl
- AnalysisParameterService
- AnalysisParameterServiceGalaxy
- AnalysisProjectShare
- AnalysisProvenanceResponse
- AnalysisProvenanceServiceGalaxy
- AnalysisRepository
- AnalysisSampleProject
- AnalysisSamples
- AnalysisSampleUpdater
- AnalysisScheduledTaskConfig
- AnalysisService
- AnalysisServiceImpl
- AnalysisSingleEndSamples
- AnalysisSistrResults
- AnalysisState
- AnalysisStateModel
- AnalysisSubmission
- AnalysisSubmission.Builder
- AnalysisSubmission.Priority
- AnalysisSubmissionCleanupService
- AnalysisSubmissionCleanupServiceImpl
- AnalysisSubmissionInfo
- AnalysisSubmissionRepository
- AnalysisSubmissionRepositoryCustom
- AnalysisSubmissionRepositoryImpl
- AnalysisSubmissionSampleProcessor
- AnalysisSubmissionSampleProcessorImpl
- AnalysisSubmissionService
- AnalysisSubmissionService.AnalysisServiceStatus
- AnalysisSubmissionServiceImpl
- AnalysisSubmissionSpecification
- AnalysisSubmissionTemplate
- AnalysisSubmissionTemplateRepository
- AnalysisTemplate
- AnalysisToolExecution
- AnalysisToolExecutionParameters
- AnalysisTreeResponse
- AnalysisType
- AnalysisTypeModel
- AnalysisTypeSet
- AnalysisTypesService
- AnalysisTypesServiceImpl
- AnalysisWorkspaceService
- AnalysisWorkspaceServiceGalaxy
- AnalyticsHandlerInterceptor
- Announcement
- AnnouncementAjaxController
- AnnouncementRepository
- AnnouncementRequest
- AnnouncementsController
- AnnouncementService
- AnnouncementServiceImpl
- AnnouncementSpecification
- AnnouncementTableModel
- AnnouncementUserJoin
- AnnouncementUserJoinRepository
- AnnouncementUserReadDetails
- AnnouncementUserTableModel
- AntPagination
- AntSearch
- AntSort
- AntTableItem
- AntTableRequest
- AntTableResponse
- AssemblySampleUpdater
- AssociatedProject
- AutomatedAnalysisFileProcessor
- AutomatedAnalysisToTemplate
- AutomatedSISTRUpdate
- BaseController
- BaseModel
- BasePermission
- BasicStatsResponse
- BioHanselSampleUpdater
- BioJavaSequenceFileUtilitiesImpl
- BreadCrumbInterceptor
- BuiltInAnalysisTypes
- Cart
- CartAjaxController
- CartController
- CartGalaxyController
- CartProjectModel
- CartProjectSample
- CartSampleModel
- CartSampleRequest
- CartSamplesByUserPermissions
- CartUpdateResponse
- ChecksumFileProcessor
- CleanupAnalysisSubmissionCondition
- CleanupAnalysisSubmissionConditionAge
- ClientsAjaxController
- ClientTableModel
- ClientTableRequest
- ConcatenateException
- ControllerExceptionHandler
- Coverage
- CoverageFileProcessor
- CoverageQCEntry
- CreateLibraryException
- CreateNamedParameterSetAjaxResponse
- CreateProjectRequest
- CreateRemoteProjectRequest
- CreateSampleRequest
- CreateUpdateClientDetails
- CRUDService
- CRUDServiceImpl
- CSVView
- CurrentUser
- CurrentUserAjaxController
- DashboardController
- DataAddedToSampleProjectEvent
- DatasetCollectionType
- DataStorage
- DataTable
- DataTablesColumnDefinitions
- DataTablesExportable
- DataTablesExportToFile
- DataTablesExportTypes
- DataTablesParams
- DataTablesRequest
- DataTablesRequestResolver
- DataTablesResponse
- DataTablesResponseModel
- DateJson
- DateJson.DateDeserializer
- DateJson.DateSerializer
- DateUtilities
- DefaultFileProcessingChain
- DeleteGalaxyObjectFailedException
- DownloadRequest
- DTProject
- DTProjectSamples
- DuplicateSampleException
- EmailController
- EmailControllerImpl
- EmailScheduledTaskConfig
- EntityExistsException
- EntityNotFoundException
- EntriesResponse
- ErrorNotification
- ErrorResponse
- ExcelCol
- ExcelData
- ExcelHeader
- ExcelRow
- ExceptionPropertyAndMessage
- ExceptionUtilities
- ExecutionManager
- ExecutionManagerConfig
- ExecutionManagerConfigurationException
- ExecutionManagerDownloadException
- ExecutionManagerException
- ExecutionManagerGalaxy
- ExecutionManagerObjectNotFoundException
- ExecutorConfig
- ExistingSampleNameException
- ExportFormatException
- ExportToFileModel
- ExportUploadService
- ExportUploadState
- Fast5Object
- Fast5Object.Fast5Type
- Fast5ObjectRemoteRepository
- Fast5ObjectRemoteRepositoryImpl
- Fast5ObjectRemoteService
- Fast5ObjectRemoteServiceImpl
- FastaView
- FastQCDetailsResponse
- FastqcFileProcessor
- FastQCImagesResponse
- FastqcToFilesystem
- FastqView
- FieldUpdate
- FileProcessingChain
- FileProcessingScheduledTaskConfig
- FileProcessor
- FileProcessorErrorQCEntry
- FileProcessorException
- FileProcessorTimeoutException
- FileSizeConverter
- FilesystemSupplementedRepository
- FilesystemSupplementedRepositoryImpl
- FilesystemSupplementedRepositoryImpl.RelativePathTranslatorListener
- FileUtilities
- FileUtils
- ForbidJpqlUpdateDeletePostProcessor
- Formats
- GalaxyAccountEmail
- GalaxyDatasetException
- GalaxyDatasetNotFoundException
- GalaxyExportAuthentication
- GalaxyExportSample
- GalaxyHistoriesService
- GalaxyJobErrorsService
- GalaxyLibrariesService
- GalaxyOutputsForWorkflowException
- GalaxyProjectName
- GalaxyRedirectionEndpointController
- GalaxySessionInterceptor
- GalaxyToolDataService
- GalaxyToolDataTableException
- GalaxyWorkflowService
- GalaxyWorkflowState
- GalaxyWorkflowStatus
- GalaxyWorkflowStatus.GalaxyWorkflowStatusBuilder
- GenbankView
- GenericsException
- GenericStatModel
- GenomeAssembly
- GenomeAssemblyFromAnalysis
- GenomeAssemblyRemoteRepository
- GenomeAssemblyRemoteRepositoryImpl
- GenomeAssemblyRemoteService
- GenomeAssemblyRemoteServiceImpl
- GenomeAssemblyRepository
- GenomeAssemblyRepositoryImpl
- GenomeAssemblyService
- GenomeAssemblyServiceImpl
- GzipFileProcessor
- HttpHeadFilter
- InfoNotification
- InMemoryTaxonomyService
- Input
- InputFileType
- InputWithOptions
- InvalidPropertyException
- IridaAccountDisabledException
- IridaAnalysisTypesServiceConfig
- IridaApiAspectsConfig
- IridaApiFilesystemRepositoryConfig
- IridaApiJdbcDataSourceConfig
- IridaApiJdbcDataSourceConfig.ApplicationContextAwareSpringLiquibase
- IridaApiPropertyPlaceholderConfig
- IridaApiRepositoriesConfig
- IridaApiSecurityConfig
- IridaApiServicesConfig
- IridaApiServicesConfig.IridaLocaleList
- IridaApplication
- IridaClientDetails
- IridaClientDetailsRepository
- IridaClientDetailsService
- IridaClientDetailsServiceImpl
- IridaClientDetailsSpecification
- IridaCustomExceptionHandler
- IridaEnvironmentPostProcessor
- IridaJpaRepository
- IridaOAuth2AuthorizationService
- IridaOAuthErrorHandler
- IridaOAuthException
- IridaOauthSecurityConfig
- IridaOauthSecurityConfig.AuthorizationServerConfig
- IridaOauthSecurityConfig.JWKConfig
- IridaOauthSecurityConfig.ResourceServerConfig
- IridaPermissionEvaluator
- IridaPlugin
- IridaPluginConfig
- IridaPluginException
- IridaPluginMessageSource
- IridaPostAuthenicationChecker
- IridaPostAuthenticationFailureHandler
- IridaRegisteredClientsRepository
- IridaRepresentationModel
- IridaRestApiWebConfig
- IridaScheduledTasksConfig
- IridaSequenceFile
- IRIDASettingsAjaxController
- IridaThing
- IridaToolParameter
- IridaUIWebConfig
- IridaWebSecurityConfig
- IridaWebSecurityConfig.UISecurityConfig
- IridaWorkflow
- IridaWorkflowAnalysisTypeException
- IridaWorkflowDefaultException
- IridaWorkflowDescription
- IridaWorkflowDynamicSourceGalaxy
- IridaWorkflowException
- IridaWorkflowIdSet
- IridaWorkflowInput
- IridaWorkflowLoaderService
- IridaWorkflowLoadException
- IridaWorkflowNamedParameters
- IridaWorkflowNoParameterException
- IridaWorkflowNotDisplayableException
- IridaWorkflowNotFoundException
- IridaWorkflowOutput
- IridaWorkflowParameter
- IridaWorkflowParameterChoice
- IridaWorkflowParameterException
- IridaWorkflowsConfig
- IridaWorkflowSet
- IridaWorkflowsService
- IridaWorkflowStructure
- IridaWorkflowToolRepository
- JobError
- JobErrorRepository
- Join
- LabelledRelationshipResource
- Latitude
- LatitudeValidator
- LaunchAjaxController
- LaunchController
- LaunchesProjectEvent
- LaunchRequest
- LaunchSample
- LineListController
- LinkNotFoundException
- ListItem
- ListResourceWrapper
- Locale
- LoginController
- LoginSuccessHandler
- Longitude
- LongitudeValidator
- ManageLocalProjectSettingsPermission
- MergeRequest
- MetadataAjaxController
- MetadataEntry
- MetadataEntryRepository
- MetadataEntryRepositoryCustom
- MetadataEntryRepositoryImpl
- MetadataFieldRepository
- MetadataFieldRepositoryCustom
- MetadataFieldRepositoryImpl
- MetadataImportFileTypeNotSupportedError
- MetadataRestriction
- MetadataRestrictionRepository
- MetadataRoleValidate
- MetadataTemplate
- MetadataTemplateField
- MetadataTemplateRepository
- MetadataTemplateService
- MetadataTemplateServiceImpl
- MethodEvent
- MinimalModel
- MissingRequiredParametersException
- ModelKeys
- ModifyProjectPermission
- MutableIridaThing
- NCBIAjaxController
- NcbiBioSampleFiles
- NcbiBioSampleFiles.Builder
- NcbiBioSampleModel
- NcbiExportSubmission
- NcbiExportSubmissionAdminTableModel
- NcbiExportSubmissionRepository
- NcbiExportSubmissionService
- NcbiExportSubmissionServiceImpl
- NcbiExportSubmissionTableModel
- NcbiInstrumentModel
- NcbiLibrarySelection
- NcbiLibrarySource
- NcbiLibraryStrategy
- NcbiPlatform
- NcbiPlatformInstrumentModel
- NCBISubmission
- NcbiSubmissionModel
- NCBISubmissionOneOf
- NcbiSubmissionRequest
- NcbiSubmissionSample
- NcbiUploadScheduledTaskConfig
- NcbiXmlParseException
- NewickFileView
- NewMemberRequest
- NewProjectMetadataRestriction
- NGSLinkerAjaxController
- NGSLinkerCmdRequest
- NGSLinkerService
- NoGalaxyHistoryException
- NoPercentageCompleteException
- NoSuchValueException
- Notification
- NotificationType
- OAuth2ResourceOwnerPasswordAuthenticationConverter
- OAuth2ResourceOwnerPasswordAuthenticationProvider
- OAuth2ResourceOwnerPasswordAuthenticationToken
- OAuthTokenRestTemplate
- OltuAuthorizationController
- OpenAPIConfig
- OverrepresentedSequence
- PagedListResponse
- PairedEndSequenceFileModel
- ParameterBuilderGalaxy
- ParameterBuilderGalaxy.ParameterId
- PasswordExpiryChecker
- PasswordReset
- PasswordResetAjaxController
- PasswordResetController
- PasswordResetRepository
- PasswordResetService
- PasswordResetServiceImpl
- PasswordReusedException
- PathConverter
- PathJson
- PathJson.PathSerializer
- Pipeline
- PipelineController
- PipelineProvidedMetadataEntry
- PostProcessingException
- PreparedWorkflow
- PreparedWorkflowGalaxy
- Priorities
- Project
- ProjectAnalysisSubmissionJoin
- ProjectAnalysisSubmissionJoinRepository
- ProjectAssociatedProjectsAjaxController
- ProjectCartSample
- ProjectControllerUtils
- ProjectCurrentUserModel
- ProjectDetailsAjaxController
- ProjectDetailsResponse
- ProjectEvent
- ProjectEventAspect
- ProjectEventEmailScheduledTask
- ProjectEventEmailScheduledTaskImpl
- ProjectEventHandler
- ProjectEventRepository
- ProjectEventService
- ProjectEventServiceImpl
- ProjectHashingService
- ProjectHashResource
- ProjectLineListController
- ProjectMembersAjaxController
- ProjectMemberTableModel
- ProjectMetadataField
- ProjectMetadataResponse
- ProjectMetadataRole
- ProjectMetadataRoleValidator
- ProjectMetadataTemplate
- ProjectMinimalModel
- ProjectModel
- ProjectObject
- ProjectOwnerPermission
- ProjectReferenceFileController
- ProjectReferenceFileJoin
- ProjectReferenceFileJoinRepository
- ProjectRemoteRepository
- ProjectRemoteRepositoryImpl
- ProjectRemoteService
- ProjectRemoteServiceImpl
- ProjectRepository
- ProjectRepositoryCustom
- ProjectRepositoryImpl
- ProjectRole
- ProjectsAjaxController
- ProjectSampleAnalysisOutputInfo
- ProjectSampleJoin
- ProjectSampleJoinRepository
- ProjectSampleJoinSpecification
- ProjectSampleMetadataAjaxController
- ProjectSampleModel
- ProjectSamplesAjaxController
- ProjectSamplesFilter
- ProjectSamplesMetadataTemplateController
- ProjectSamplesTableRequest
- ProjectSampleTableItem
- ProjectsController
- ProjectService
- ProjectServiceImpl
- ProjectSettingsAjaxController
- ProjectSettingsRemoteAjaxController
- ProjectSubscription
- ProjectSubscriptionRepository
- ProjectSubscriptionsAjaxController
- ProjectSubscriptionService
- ProjectSubscriptionServiceImpl
- ProjectSyncFrequency
- ProjectSynchronizationAuthenticationToken
- ProjectSynchronizationException
- ProjectSynchronizationService
- ProjectSyncScheduledTaskConfig
- ProjectUserGroupsAjaxController
- ProjectUserGroupsTableModel
- ProjectUserJoin
- ProjectUserJoinRepository
- ProjectWithoutOwnerException
- QCEntry
- QCEntry.QCEntryStatus
- QCEntry.QCEntryType
- QCEntryRepository
- ReadAnalysisPermission
- ReadAnalysisSubmissionPermission
- ReadExportSubmissionPermission
- ReadMetadataEntryPermission
- ReadMetadataTemplatePermission
- ReadProjectMetadataResponsePermission
- ReadProjectPermission
- ReadReferenceFilePermission
- ReadSamplePermission
- ReadSequencingObjectPermission
- ReadSequencingRunPermission
- RecursiveDeleteVisitor
- ReferenceFile
- ReferenceFileAjaxController
- ReferenceFileRepository
- ReferenceFileRepositoryImpl
- ReferenceFileRequiredException
- ReferenceFileService
- ReferenceFileServiceImpl
- RelatedProjectJoin
- RelatedProjectRepository
- RemoteAPI
- RemoteAPIAjaxController
- RemoteAPIController
- RemoteAPIModel
- RemoteAPIRepository
- RemoteAPIService
- RemoteAPIServiceImpl
- RemoteAPISpecification
- RemoteAPITableAdminModel
- RemoteAPITableModel
- RemoteAPIToken
- RemoteApiTokenRepository
- RemoteAPITokenService
- RemoteAPITokenServiceImpl
- RemoteFileNotCachedException
- RemoteProjectModel
- RemoteProjectSettings
- RemoteProjectSettingsUpdateRequest
- RemoteRepository
- RemoteRepositoryImpl
- RemoteService
- RemoteServiceImpl
- RemoteStatus
- RemoteStatus.SyncStatus
- RemoteSynchronizable
- RemoveSamplesRequest
- RepositoryBackedPermission
- ResourceAdditionalProperties
- ResourceCollection
- ResourceList
- ResourceWrapper
- ResponseDetails
- ResponseProjectResource
- ResponseResource
- RESTAnalysisSubmissionController
- RESTGenericController
- RESTOAuthAuthorizationConsentController
- RESTProjectAnalysisController
- RESTProjectSamplesController
- RESTProjectsController
- RESTProjectUsersController
- RESTRootController
- RESTSampleAssemblyController
- RESTSampleMetadataController
- RESTSampleSequenceFilesController
- RESTSequencingRunController
- RESTSequencingRunSequenceFilesController
- RESTUsersController
- Role
- Role
- Role
- RoleMixin
- RoleUtilities
- RootResource
- RunAsUser
- RunAsUserAspect
- Sample
- SampleAddedProjectEvent
- SampleAnalyses
- SampleAnalysisDuplicateException
- SampleDetails
- SampleExportFiles
- SampleFiles
- SampleFilesResponse
- SampleGenomeAssemblyFileModel
- SampleGenomeAssemblyJoin
- SampleGenomeAssemblyJoinRepository
- SampleMergeException
- SampleMetadata
- SampleMetadataFieldEntry
- SampleMetadataResponse
- SampleMetadataStorage
- SampleMetadataStorageRow
- SampleNameValidationResponse
- SampleObject
- SamplePairer
- SampleRemoteRepository
- SampleRemoteRepositoryImpl
- SampleRemoteService
- SampleRemoteServiceImpl
- SampleRemovedProjectEvent
- SampleRepository
- SampleRepositoryCustom
- SampleRepositoryImpl
- SamplesAjaxController
- SampleSequencingObjectFileModel
- SampleSequencingObjectJoin
- SampleSequencingObjectJoinRepository
- SampleSequencingObjectSpecification
- SampleService
- SampleServiceImpl
- SavedMetadataErrorResponse
- SavedMetadataException
- SavedPipelineParameters
- SavePipelineParametersRequest
- SchemaExporter
- SearchController
- SearchCriteria
- SearchOperation
- SelectOption
- SequenceConcatenation
- SequenceConcatenationRepository
- SequenceFile
- SequenceFileAjaxController
- SequenceFileAnalysisException
- SequenceFileDetails
- SequenceFileMessageConverter
- SequenceFileModel
- SequenceFilePair
- SequenceFilePairConcatenator
- SequenceFilePairRemoteRepository
- SequenceFilePairRemoteRepositoryImpl
- SequenceFilePairRemoteService
- SequenceFilePairRemoteServiceImpl
- SequenceFileProcessorLauncher
- SequenceFileRemoteRepository
- SequenceFileRemoteRepositoryImpl
- SequenceFileRepository
- SequenceFileRepositoryImpl
- SequenceFileResource
- SequenceFileUtilities
- SequencerUILoginException
- SequencingObject
- SequencingObject.ProcessingState
- SequencingObjectConcatenator
- SequencingObjectConcatenatorFactory
- SequencingObjectProcessingService
- SequencingObjectRemoteService
- SequencingObjectRemoteServiceImpl
- SequencingObjectRepository
- SequencingObjectService
- SequencingObjectServiceImpl
- SequencingRun
- SequencingRun.LayoutType
- SequencingRunAjaxController
- SequencingRunController
- SequencingRunDetails
- SequencingRunModel
- SequencingRunRepository
- SequencingRunService
- SequencingRunServiceImpl
- SequencingRunsListRequest
- SequencingRunUploadStatus
- ServletInitializer
- SessionFilter
- ShareMetadataRestriction
- ShareSamplesRequest
- SingleEndSequenceFile
- SingleEndSequenceFileConcatenator
- SingleEndSequenceFileModel
- SingleEndSequenceFileRemoteRepository
- SingleEndSequenceFileRemoteRepositoryImpl
- SingleEndSequenceFileRemoteService
- SingleEndSequenceFileRemoteServiceImpl
- SistrResult
- SISTRSampleUpdater
- SlashFilter
- StateFilter
- StaticMetadataTemplateField
- StatisticsResponse
- StatisticTimePeriod
- StorageException
- SubmissionIds
- SuccessNotification
- TableModel
- TableModel
- TableRequest
- TableRequest
- TableResponse
- TableResponse
- TaxonomyAjaxController
- TaxonomyEntry
- TaxonomyService
- TestEmailController
- Timestamped
- TimestampJson
- TimestampJson.TimestampSerializer
- TimestampMixin
- ToolExecution
- ToolsListExporter
- TreeNode
- UIActivitiesService
- UIAddAssociatedProjectException
- UIAdminStatisticsService
- UIAnalysesOutputsService
- UIAnalysesService
- UIAnnouncementsService
- UIAssociatedProjectsService
- UICartService
- UIClientService
- UIConstraintViolationException
- UIEmailSendException
- UIEntityNotFoundException
- UIMetadataField
- UIMetadataFieldDefault
- UIMetadataFileImportService
- UIMetadataImportService
- UIMetadataService
- UIMetadataTemplate
- UINcbiService
- UIPasswordResetService
- UIPipelineDetailsResponse
- UIPipelineSampleService
- UIPipelineService
- UIPipelineStartService
- UIProjectMembersService
- UIProjectReferenceFileService
- UIProjectSampleService
- UIProjectsService
- UIProjectSubscriptionService
- UIProjectUserGroupsService
- UIProjectWithoutOwnerException
- UIReferenceFile
- UIRemoteAPIService
- UIRemoteProjectService
- UIRemoveAssociatedProjectException
- UISampleFilter
- UISampleMetadata
- UISampleService
- UISequenceFileService
- UISequencingRunService
- UISettingsService
- UIShareSamplesException
- UIUserFormException
- UIUserGroupsService
- UIUsersService
- UIUserStatisticsService
- UIUserStatusException
- UnauthenticatedAnonymousAuthenticationFilter
- UndefinedPermissionException
- UnsupportedReferenceFileContentError
- UpdateAnalysisSubmissionPermission
- UpdatedAnalysisProgress
- UpdatedAnalysisTableProgress
- UpdateException
- UpdateMetadataTemplatePermission
- UpdateProjectAttributeRequest
- UpdateReferenceFilePermission
- UpdateSampleAttributeRequest
- UpdateSampleMetadataRequest
- UpdateSamplePermission
- UpdateSampleRequest
- UpdateSamplesFromAnalysisSubmissionPermission
- UpdateSequencingRunPermission
- UpdateUserGroupPermission
- UpdateUserPermission
- UploadConnectionException
- UploadedAssembly
- UploaderAccountName
- UploadErrorException
- UploadException
- UploadProjectName
- UploadReferenceFilesResponse
- UploadTimeoutException
- User
- UserCreateRequest
- UserDetailsModel
- UserDetailsResponse
- UserEditRequest
- UserGroup
- UserGroupDetails
- UserGroupJoin
- UserGroupJoin.UserGroupRole
- UserGroupJoinRepository
- UserGroupMember
- UserGroupProjectJoin
- UserGroupProjectJoinRepository
- UserGroupProjectTableModel
- UserGroupRemovedProjectEvent
- UserGroupRepository
- UserGroupRole
- UserGroupRoleSetProjectEvent
- UserGroupsAjaxController
- UserGroupsController
- UserGroupService
- UserGroupServiceImpl
- UserGroupSpecification
- UserGroupTableModel
- UserGroupWithoutOwnerException
- UserMinimalModel
- UserMixin
- UserPasswordResetDetails
- UserProjectDetailsModel
- UserRemovedProjectEvent
- UserRepository
- UserRepositoryCustom
- UserRepositoryImpl
- UserRevEntity
- UserRevListener
- UserRoleSetProjectEvent
- UsersAjaxController
- UsersController
- UserSecurityInterceptor
- UserService
- UserServiceImpl
- UserSpecification
- UserStatisticsAjaxController
- UserStatisticsResponse
- ValidateSampleNameModel
- ValidateSampleNamesRequest
- ValidateSampleNamesResponse
- ValidMethodParametersAspect
- ValidProjectName
- ValidProjectName.ValidProjectNameBlocklist
- ValidSampleName
- ValidSampleName.ValidSampleNameBlocklist
- VersionedFileFields
- WarnNotification
- WebEmailConfig
- WebEmailConfig.ConfigurableJavaMailSender
- WebEmailConfig.ConfigurableJavaMailSenderImpl
- WebpackAssetsManifest
- WebpackAssetsManifestDeserializer
- WebpackEntry
- WebpackEntryDeserializer
- WebpackerCSSElementTagProcessor
- WebpackerDialect
- WebpackerJavascriptElementTagProcessor
- WebpackerManifestParser
- WebpackerScriptAttributeTagProcessor
- WebpackerTagType
- WebpackParserException
- WebStylesConfig
- WorkflowException
- WorkflowInputsGalaxy
- WorkflowInputsGeneric
- WorkflowInvalidException
- WorkflowNamedParametersRepository
- WorkflowNamedParametersService
- WorkflowNamedParametersServiceImpl
- WorkflowPreprationException
- WorkflowUploadException