Interface AnalysisSampleUpdater
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- All Known Implementing Classes:
AssemblySampleUpdater
,BioHanselSampleUpdater
,SISTRSampleUpdater
public interface AnalysisSampleUpdater
A service for updating samples with results from a particularAnalysis
type.
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Method Summary
All Methods Instance Methods Abstract Methods Modifier and Type Method Description AnalysisType
getAnalysisType()
Gets theAnalysisType
this updater service handles.void
update(java.util.Collection<Sample> samples, AnalysisSubmission analysis)
Updates a collection of samples with a particular analysis result.
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Method Detail
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update
void update(java.util.Collection<Sample> samples, AnalysisSubmission analysis) throws PostProcessingException
Updates a collection of samples with a particular analysis result.- Parameters:
samples
- The samples to update.analysis
- TheAnalysisSubmission
to use for updating.- Throws:
PostProcessingException
- if the updater could not complete its processing
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getAnalysisType
AnalysisType getAnalysisType()
Gets theAnalysisType
this updater service handles.- Returns:
- The
AnalysisType
.
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