Package ca.corefacility.bioinformatics.irida.repositories.remote

Interface GenomeAssemblyRemoteRepository

All Superinterfaces:

RemoteRepository<UploadedAssembly>

All Known Implementing Classes:

GenomeAssemblyRemoteRepositoryImpl

public interface GenomeAssemblyRemoteRepository
extends RemoteRepository<UploadedAssembly>

Repository for synchronizing GenomeAssembly from a RemoteAPI

Method Summary

Modifier and Type	Method	Description
java.nio.file.Path	downloadRemoteAssembly(java.lang.String uri, RemoteAPI remoteAPI)	Download a GenomeAssembly fom the given RemoteAPI with a default MediaType
java.nio.file.Path	downloadRemoteAssembly(java.lang.String uri, RemoteAPI remoteAPI, org.springframework.http.MediaType... mediaTypes)	Download a GenomeAssembly fom the given RemoteAPI

Methods inherited from interface ca.corefacility.bioinformatics.irida.repositories.remote.RemoteRepository

getServiceStatus, list, read

Method Detail

downloadRemoteAssembly

java.nio.file.Path downloadRemoteAssembly(java.lang.String uri,
                                          RemoteAPI remoteAPI,
                                          org.springframework.http.MediaType... mediaTypes)

Download a GenomeAssembly fom the given RemoteAPI

Parameters:

uri - URI of the assembly to download

remoteAPI - the RemoteAPI for the request

mediaTypes - the MediaType to use for the request

Returns:

a Path to the downloaded file

downloadRemoteAssembly

java.nio.file.Path downloadRemoteAssembly(java.lang.String uri,
                                          RemoteAPI remoteAPI)

Download a GenomeAssembly fom the given RemoteAPI with a default MediaType

Parameters:

uri - URI of the assembly to download

remoteAPI - the RemoteAPI for the request

Returns:

a Path to the downloaded file