Package ca.corefacility.bioinformatics.irida.ria.web.services

Class UIAnalysesOutputsService

java.lang.Object

ca.corefacility.bioinformatics.irida.ria.web.services.UIAnalysesOutputsService

@Component
@Scope("session")
public class UIAnalysesOutputsService
extends java.lang.Object

UI Service for all things related to project single sample analysis outputs.

Constructor Summary

Constructors

Constructor	Description
UIAnalysesOutputsService(AnalysisSubmissionService analysisSubmissionService, IridaWorkflowsService workflowsService, UserService userService, AnalysisOutputFileDownloadManager analysisOutputFileDownloadManager)

Method Summary

Modifier and Type	Method	Description
void	downloadAnalysisOutputsSelection(java.lang.String filename, javax.servlet.http.HttpServletResponse response)	Download the selected AnalysisOutputFile.
void	downloadIndividualAnalysisOutputFile(java.lang.Long analysisSubmissionId, java.lang.Long fileId, java.lang.String filename, javax.servlet.http.HttpServletResponse response)	Download analysis output file
java.util.List<ProjectSampleAnalysisOutputInfo>	getAutomatedSingleSampleOutputs(java.lang.Long projectId)	Get all the automated single sample analysis outputs for the project
java.util.List<ProjectSampleAnalysisOutputInfo>	getSharedSingleSampleOutputs(java.lang.Long projectId)	Get all the shared single sample analysis outputs for the project
java.util.List<ProjectSampleAnalysisOutputInfo>	getUserSingleSampleOutputs()	Get all the logged in user single sample analysis outputs
void	prepareAnalysisOutputsSelectionDownload(java.util.List<ProjectSampleAnalysisOutputInfo> outputs)	Prepare the download of multiple AnalysisOutputFile by adding them to a selection.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

UIAnalysesOutputsService

@Autowired
public UIAnalysesOutputsService(AnalysisSubmissionService analysisSubmissionService,
                                IridaWorkflowsService workflowsService,
                                UserService userService,
                                AnalysisOutputFileDownloadManager analysisOutputFileDownloadManager)

Method Detail

getSharedSingleSampleOutputs

public java.util.List<ProjectSampleAnalysisOutputInfo> getSharedSingleSampleOutputs(java.lang.Long projectId)

Get all the shared single sample analysis outputs for the project

Parameters:

projectId - Project id

Returns:

a list of filtered ProjectSampleAnalysisOutputInfo single sample analysis outputs

getAutomatedSingleSampleOutputs

public java.util.List<ProjectSampleAnalysisOutputInfo> getAutomatedSingleSampleOutputs(java.lang.Long projectId)

Get all the automated single sample analysis outputs for the project

Parameters:

projectId - Project id

Returns:

a list of filtered ProjectSampleAnalysisOutputInfo single sample analysis outputs

getUserSingleSampleOutputs

public java.util.List<ProjectSampleAnalysisOutputInfo> getUserSingleSampleOutputs()

Get all the logged in user single sample analysis outputs

Returns:

a list of filtered ProjectSampleAnalysisOutputInfo single sample analysis outputs for the user

prepareAnalysisOutputsSelectionDownload

public void prepareAnalysisOutputsSelectionDownload(java.util.List<ProjectSampleAnalysisOutputInfo> outputs)

Prepare the download of multiple AnalysisOutputFile by adding them to a selection.

Parameters:

outputs - Info for AnalysisOutputFile to download

downloadAnalysisOutputsSelection

public void downloadAnalysisOutputsSelection(java.lang.String filename,
                                             javax.servlet.http.HttpServletResponse response)

Download the selected AnalysisOutputFile.

Parameters:

filename - Filename for file download.

response - HttpServletResponse

downloadIndividualAnalysisOutputFile

public void downloadIndividualAnalysisOutputFile(java.lang.Long analysisSubmissionId,
                                                 java.lang.Long fileId,
                                                 java.lang.String filename,
                                                 javax.servlet.http.HttpServletResponse response)

Download analysis output file

Parameters:

analysisSubmissionId - Id for a AnalysisSubmission

fileId - the id of the file to download

filename - Optional filename for file download.

response - HttpServletResponse