Package ca.corefacility.bioinformatics.irida.service.remote.impl

Class SampleRemoteServiceImpl

java.lang.Object

ca.corefacility.bioinformatics.irida.service.remote.impl.RemoteServiceImpl<Sample>

ca.corefacility.bioinformatics.irida.service.remote.impl.SampleRemoteServiceImpl

All Implemented Interfaces:

RemoteService<Sample>, SampleRemoteService

@Service
public class SampleRemoteServiceImpl
extends RemoteServiceImpl<Sample>
implements SampleRemoteService

Implementation of SampleRemoteService using SampleRemoteRepository

Field Summary

Fields

Modifier and Type	Field	Description
static java.lang.String	FILE_SAMPLE_REL
static java.lang.String	PROJECT_SAMPLES_REL
static java.lang.String	SAMPLES_CACHE_NAME

Constructor Summary

Constructors

Constructor	Description
SampleRemoteServiceImpl(SampleRemoteRepository sampleRemoteRepository, RemoteAPIRepository apiRepository)

Method Summary

Modifier and Type	Method	Description
java.util.Map<java.lang.String,MetadataEntry>	getSampleMetadata(Sample sample)	Get the Sample metadata for a remote sample
java.util.List<Sample>	getSamplesForProject(Project project)	Get the Samples that exist in a Project

Methods inherited from class ca.corefacility.bioinformatics.irida.service.remote.impl.RemoteServiceImpl

getRemoteApiForURI, getServiceStatus, list, read, read

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface ca.corefacility.bioinformatics.irida.service.remote.RemoteService

getServiceStatus, list, read, read

Field Detail

PROJECT_SAMPLES_REL

public static final java.lang.String PROJECT_SAMPLES_REL

See Also:

Constant Field Values

SAMPLES_CACHE_NAME

public static final java.lang.String SAMPLES_CACHE_NAME

See Also:

Constant Field Values

FILE_SAMPLE_REL

public static final java.lang.String FILE_SAMPLE_REL

See Also:

Constant Field Values

Constructor Detail

SampleRemoteServiceImpl

@Autowired
public SampleRemoteServiceImpl(SampleRemoteRepository sampleRemoteRepository,
                               RemoteAPIRepository apiRepository)

Method Detail

getSamplesForProject

public java.util.List<Sample> getSamplesForProject(Project project)

Get the Samples that exist in a Project

Specified by:

getSamplesForProject in interface SampleRemoteService

Parameters:

project - The Project to get samples from

Returns:

A List of Samples

getSampleMetadata

public java.util.Map<java.lang.String,MetadataEntry> getSampleMetadata(Sample sample)

Get the Sample metadata for a remote sample

Specified by:

getSampleMetadata in interface SampleRemoteService

Parameters:

sample - the sample to get metadata for

Returns:

a map of String to MetadataEntry. Before saving the String component must be converted to MetadataTemplateField