Package ca.corefacility.bioinformatics.irida.ria.web.analysis.dto

Class SistrResult

java.lang.Object

ca.corefacility.bioinformatics.irida.ria.web.analysis.dto.SistrResult

public class SistrResult
extends java.lang.Object

Used as a response for encapsulating a SISTR result object

Constructor Summary

Constructors

Constructor	Description
SistrResult()
SistrResult(java.lang.String qcStatus, java.lang.String qcMessages, java.lang.String serovar, java.lang.String serovarAntigen, java.lang.String serovarCgmlst, java.lang.String serogroup, java.lang.String h1, java.lang.String h2, java.lang.String oAntigen, java.lang.Long cgmlstST, java.lang.String cgmlstSubspecies, java.lang.String cgmlstGenomeMatch, java.lang.Float cgmlstDistance, java.lang.Integer cgmlstMatchingAlleles, java.lang.Integer cgmlstFoundAlleles, java.lang.String mashSubspecies, java.lang.String mashSerovar, java.lang.String mashGenome, java.lang.Float mashDistance)

Method Summary

Modifier and Type	Method	Description
java.lang.Float	getCgmlstDistance()
java.lang.Integer	getCgmlstFoundAlleles()
java.lang.String	getCgmlstGenomeMatch()
java.lang.Integer	getCgmlstMatchingAlleles()
java.lang.Long	getCgmlstST()
java.lang.String	getCgmlstSubspecies()
java.lang.String	getH1()
java.lang.String	getH2()
java.lang.Float	getMashDistance()
java.lang.String	getMashGenome()
java.lang.String	getMashSerovar()
java.lang.String	getMashSubspecies()
java.lang.String	getOAntigen()
java.lang.String	getQcMessages()
java.lang.String	getQcStatus()
java.lang.String	getSerogroup()
java.lang.String	getSerovar()
java.lang.String	getSerovarAntigen()
java.lang.String	getSerovarCgmlst()
void	setCgmlstDistance(java.lang.Float cgmlstDistance)
void	setCgmlstFoundAlleles(java.lang.Integer cgmlstFoundAlleles)
void	setCgmlstGenomeMatch(java.lang.String cgmlstGenomeMatch)
void	setCgmlstMatchingAlleles(java.lang.Integer cgmlstMatchingAlleles)
void	setCgmlstST(java.lang.Long cgmlstST)
void	setCgmlstSubspecies(java.lang.String cgmlstSubspecies)
void	setH1(java.lang.String h1)
void	setH2(java.lang.String h2)
void	setMashDistance(java.lang.Float mashDistance)
void	setMashGenome(java.lang.String mashGenome)
void	setMashSerovar(java.lang.String mashSerovar)
void	setMashSubspecies(java.lang.String mashSubspecies)
void	setOAntigen(java.lang.String oAntigen)
void	setQcMessages(java.lang.String qcMessages)
void	setQcStatus(java.lang.String qcStatus)
void	setSerogroup(java.lang.String serogroup)
void	setSerovar(java.lang.String serovar)
void	setSerovarAntigen(java.lang.String serovarAntigen)
void	setSerovarCgmlst(java.lang.String serovarCgmlst)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

SistrResult

public SistrResult()

SistrResult

public SistrResult(java.lang.String qcStatus,
                   java.lang.String qcMessages,
                   java.lang.String serovar,
                   java.lang.String serovarAntigen,
                   java.lang.String serovarCgmlst,
                   java.lang.String serogroup,
                   java.lang.String h1,
                   java.lang.String h2,
                   java.lang.String oAntigen,
                   java.lang.Long cgmlstST,
                   java.lang.String cgmlstSubspecies,
                   java.lang.String cgmlstGenomeMatch,
                   java.lang.Float cgmlstDistance,
                   java.lang.Integer cgmlstMatchingAlleles,
                   java.lang.Integer cgmlstFoundAlleles,
                   java.lang.String mashSubspecies,
                   java.lang.String mashSerovar,
                   java.lang.String mashGenome,
                   java.lang.Float mashDistance)

Method Detail

getQcStatus

public java.lang.String getQcStatus()

setQcStatus

public void setQcStatus(java.lang.String qcStatus)

getQcMessages

public java.lang.String getQcMessages()

setQcMessages

public void setQcMessages(java.lang.String qcMessages)

getSerovar

public java.lang.String getSerovar()

setSerovar

public void setSerovar(java.lang.String serovar)

getSerovarAntigen

public java.lang.String getSerovarAntigen()

setSerovarAntigen

public void setSerovarAntigen(java.lang.String serovarAntigen)

getSerovarCgmlst

public java.lang.String getSerovarCgmlst()

setSerovarCgmlst

public void setSerovarCgmlst(java.lang.String serovarCgmlst)

getSerogroup

public java.lang.String getSerogroup()

setSerogroup

public void setSerogroup(java.lang.String serogroup)

getH1

public java.lang.String getH1()

setH1

public void setH1(java.lang.String h1)

getH2

public java.lang.String getH2()

setH2

public void setH2(java.lang.String h2)

getOAntigen

public java.lang.String getOAntigen()

setOAntigen

public void setOAntigen(java.lang.String oAntigen)

getCgmlstST

public java.lang.Long getCgmlstST()

setCgmlstST

public void setCgmlstST(java.lang.Long cgmlstST)

getCgmlstSubspecies

public java.lang.String getCgmlstSubspecies()

setCgmlstSubspecies

public void setCgmlstSubspecies(java.lang.String cgmlstSubspecies)

getCgmlstGenomeMatch

public java.lang.String getCgmlstGenomeMatch()

setCgmlstGenomeMatch

public void setCgmlstGenomeMatch(java.lang.String cgmlstGenomeMatch)

getCgmlstDistance

public java.lang.Float getCgmlstDistance()

setCgmlstDistance

public void setCgmlstDistance(java.lang.Float cgmlstDistance)

getCgmlstMatchingAlleles

public java.lang.Integer getCgmlstMatchingAlleles()

setCgmlstMatchingAlleles

public void setCgmlstMatchingAlleles(java.lang.Integer cgmlstMatchingAlleles)

getCgmlstFoundAlleles

public java.lang.Integer getCgmlstFoundAlleles()

setCgmlstFoundAlleles

public void setCgmlstFoundAlleles(java.lang.Integer cgmlstFoundAlleles)

getMashSubspecies

public java.lang.String getMashSubspecies()

setMashSubspecies

public void setMashSubspecies(java.lang.String mashSubspecies)

getMashSerovar

public java.lang.String getMashSerovar()

setMashSerovar

public void setMashSerovar(java.lang.String mashSerovar)

getMashGenome

public java.lang.String getMashGenome()

setMashGenome

public void setMashGenome(java.lang.String mashGenome)

getMashDistance

public java.lang.Float getMashDistance()

setMashDistance

public void setMashDistance(java.lang.Float mashDistance)