Package ca.corefacility.bioinformatics.irida.repositories.analysis.submission

Interface AnalysisSubmissionRepositoryCustom

All Known Implementing Classes:

AnalysisSubmissionRepositoryImpl

public interface AnalysisSubmissionRepositoryCustom

Interface for methods using native SQL queries to get AnalysisOutputFile info for Project and User

Method Summary

Modifier and Type	Method	Description
java.util.List<ProjectSampleAnalysisOutputInfo>	getAllAnalysisOutputInfoSharedWithProject(java.lang.Long projectId, java.util.Set<java.util.UUID> workflowIds)	Get all ProjectSampleAnalysisOutputInfo shared with a Project.
java.util.List<ProjectSampleAnalysisOutputInfo>	getAllAutomatedAnalysisOutputInfoForAProject(java.lang.Long projectId, java.util.Set<java.util.UUID> workflowIds)	Get all automated ProjectSampleAnalysisOutputInfo for a Project.
java.util.List<ProjectSampleAnalysisOutputInfo>	getAllUserAnalysisOutputInfo(java.lang.Long userId)	Get all User generated analysis output information.

Method Detail

getAllAnalysisOutputInfoSharedWithProject

java.util.List<ProjectSampleAnalysisOutputInfo> getAllAnalysisOutputInfoSharedWithProject(java.lang.Long projectId,
                                                                                          java.util.Set<java.util.UUID> workflowIds)

Get all ProjectSampleAnalysisOutputInfo shared with a Project.

Parameters:

projectId - Project id

workflowIds - Workflow UUIDs of workflow pipelines to get output files for

Returns:

a list of ProjectSampleAnalysisOutputInfo

getAllAutomatedAnalysisOutputInfoForAProject

java.util.List<ProjectSampleAnalysisOutputInfo> getAllAutomatedAnalysisOutputInfoForAProject(java.lang.Long projectId,
                                                                                             java.util.Set<java.util.UUID> workflowIds)

Get all automated ProjectSampleAnalysisOutputInfo for a Project.

Parameters:

projectId - Project id

workflowIds - Workflow UUIDs of workflow pipelines to get output files for

Returns:

a list of ProjectSampleAnalysisOutputInfo

getAllUserAnalysisOutputInfo

java.util.List<ProjectSampleAnalysisOutputInfo> getAllUserAnalysisOutputInfo(java.lang.Long userId)

Get all User generated analysis output information.

Parameters:

userId - User id

Returns:

a list of ProjectSampleAnalysisOutputInfo