Package ca.corefacility.bioinformatics.irida.repositories.remote.impl

Class RemoteRepositoryImpl<Type extends IridaRepresentationModel>

java.lang.Object

ca.corefacility.bioinformatics.irida.repositories.remote.impl.RemoteRepositoryImpl<Type>

Type Parameters:

Type - The type of object to be stored in this repository (extends IridaRepresentationModel)

All Implemented Interfaces:

RemoteRepository<Type>

Direct Known Subclasses:

Fast5ObjectRemoteRepositoryImpl, GenomeAssemblyRemoteRepositoryImpl, ProjectRemoteRepositoryImpl, SampleRemoteRepositoryImpl, SequenceFilePairRemoteRepositoryImpl, SequenceFileRemoteRepositoryImpl, SingleEndSequenceFileRemoteRepositoryImpl

public abstract class RemoteRepositoryImpl<Type extends IridaRepresentationModel>
extends java.lang.Object
implements RemoteRepository<Type>

Remote repository to request from remote IRIDA instances using OAuthTokenRestTemplates

Field Summary

Fields

Modifier and Type	Field	Description
protected org.springframework.core.ParameterizedTypeReference<ListResourceWrapper<Type>>	listTypeReference
protected org.springframework.core.ParameterizedTypeReference<ResourceWrapper<Type>>	objectTypeReference

Constructor Summary

Constructors

Constructor	Description
RemoteRepositoryImpl(RemoteAPITokenService tokenService, UserService userService, org.springframework.core.ParameterizedTypeReference<ListResourceWrapper<Type>> listTypeReference, org.springframework.core.ParameterizedTypeReference<ResourceWrapper<Type>> objectTypeReference)	Create a new repository with the given rest template and object params

Method Summary

Modifier and Type	Method	Description
boolean	getServiceStatus(RemoteAPI remoteAPI)	Get the status of the remote service
java.util.List<Type>	list(java.lang.String uri, RemoteAPI remoteAPI)	List the resources available from this service
Type	read(java.lang.String uri, RemoteAPI remoteAPI)	Read an individual resource
protected <T extends IridaRepresentationModel> T	setRemoteStatus(T entity, RemoteAPI api)	Set the RemoteStatus of a read remote entity

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

listTypeReference

protected final org.springframework.core.ParameterizedTypeReference<ListResourceWrapper<Type extends IridaRepresentationModel>> listTypeReference

objectTypeReference

protected final org.springframework.core.ParameterizedTypeReference<ResourceWrapper<Type extends IridaRepresentationModel>> objectTypeReference

Constructor Detail

RemoteRepositoryImpl

public RemoteRepositoryImpl(RemoteAPITokenService tokenService,
                            UserService userService,
                            org.springframework.core.ParameterizedTypeReference<ListResourceWrapper<Type>> listTypeReference,
                            org.springframework.core.ParameterizedTypeReference<ResourceWrapper<Type>> objectTypeReference)

Create a new repository with the given rest template and object params

Parameters:

tokenService - service storing api tokens for communication with the remote APIs

userService - service for reading users

listTypeReference - A ParameterizedTypeReference for objects listed by the rest template

objectTypeReference - A ParameterizedTypeReference for individual resources read by the rest template

Method Detail

read

public Type read(java.lang.String uri,
                 RemoteAPI remoteAPI)

Read an individual resource

Specified by:

read in interface RemoteRepository<Type extends IridaRepresentationModel>

Parameters:

uri - The URI of the resource to read

remoteAPI - the API to read from

Returns:

An object of Type

list

public java.util.List<Type> list(java.lang.String uri,
                                 RemoteAPI remoteAPI)

List the resources available from this service

Specified by:

list in interface RemoteRepository<Type extends IridaRepresentationModel>

Parameters:

uri - the URI of the resource to list.

remoteAPI - The API to read from

Returns:

A List<Type> of the resources available

getServiceStatus

public boolean getServiceStatus(RemoteAPI remoteAPI)

Get the status of the remote service

Specified by:

getServiceStatus in interface RemoteRepository<Type extends IridaRepresentationModel>

Parameters:

remoteAPI - The API to check status for

Returns:

true if the service is active

setRemoteStatus

protected <T extends IridaRepresentationModel> T setRemoteStatus(T entity,
                                                                 RemoteAPI api)

Set the RemoteStatus of a read remote entity

Type Parameters:

T - The type of entity you're setting status of

Parameters:

entity - The entity to set the remote status on

api - The API to connect to

Returns:

the enhanced entity