Package ca.corefacility.bioinformatics.irida.service.analysis.execution

Class AnalysisExecutionServiceAspect

java.lang.Object

ca.corefacility.bioinformatics.irida.service.analysis.execution.AnalysisExecutionServiceAspect

@Order(999)
public class AnalysisExecutionServiceAspect
extends java.lang.Object

Switches an AnalysisSubmission to an error state on an exception when being submitted for analysis. The Order here needs to be a value between the order of AnalysisExecutionServiceGalaxyAsync ( AnalysisExecutionServiceConfig.ASYNC_ORDER) and the order of the Transaction Manager ( IridaApiRepositoriesConfig.TRANSACTION_MANAGEMENT_ORDER). This means that the order of execution is AnalysisExecutionServiceGalaxyAsync, then AnalysisExecutionServiceAspect, then Transaction Manager.

Field Summary

Fields

Modifier and Type	Field	Description
static int	ANALYSIS_EXECUTION_ASPECT_ORDER	Defines the order for the AnalysisExecutionServiceAspect.

Constructor Summary

Constructors

Constructor	Description
AnalysisExecutionServiceAspect(AnalysisSubmissionRepository analysisSubmissionRepository, EmailController emailController)

Method Summary

Modifier and Type	Method	Description
void	toErrorStateOnCleaningException(AnalysisSubmission analysisSubmission, java.lang.Exception exception)	Aspect that matches any asynchronous calls for cleaning analysis submissions and switches to a cleaned error state.
void	toErrorStateOnException(AnalysisSubmission analysisSubmission, java.lang.Exception exception)	Aspect that matches any asynchronous calls for performing analysis submissions and switches the submission to an error state on an exception.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

ANALYSIS_EXECUTION_ASPECT_ORDER

public static final int ANALYSIS_EXECUTION_ASPECT_ORDER

Defines the order for the AnalysisExecutionServiceAspect.

See Also:

Constant Field Values

Constructor Detail

AnalysisExecutionServiceAspect

@Autowired
public AnalysisExecutionServiceAspect(AnalysisSubmissionRepository analysisSubmissionRepository,
                                      EmailController emailController)

Method Detail

toErrorStateOnException

public void toErrorStateOnException(AnalysisSubmission analysisSubmission,
                                    java.lang.Exception exception)

Aspect that matches any asynchronous calls for performing analysis submissions and switches the submission to an error state on an exception.

Parameters:

analysisSubmission - The submission that has failed.

exception - The exception that was thrown.

toErrorStateOnCleaningException

public void toErrorStateOnCleaningException(AnalysisSubmission analysisSubmission,
                                            java.lang.Exception exception)

Aspect that matches any asynchronous calls for cleaning analysis submissions and switches to a cleaned error state. exception.

Parameters:

analysisSubmission - The submission that has failed to be cleaned.

exception - The exception that was thrown.