Package ca.corefacility.bioinformatics.irida.ria.web.models.export

Class NcbiBioSampleModel

java.lang.Object

ca.corefacility.bioinformatics.irida.ria.web.models.export.NcbiBioSampleModel

public class NcbiBioSampleModel
extends java.lang.Object

Describes an NCBI SRA Submission's BioSample's files for the UI.

Constructor Summary

Constructors

Constructor	Description
NcbiBioSampleModel(NcbiBioSampleFiles bioSample)

Method Summary

Modifier and Type	Method	Description
java.lang.String	getAccession()
java.lang.String	getBioSample()
java.lang.String	getId()
java.lang.String	getInstrumentModel()
java.lang.String	getLibraryConstructionProtocol()
java.lang.String	getLibraryName()
java.lang.String	getLibrarySelection()
java.lang.String	getLibrarySource()
java.lang.String	getLibraryStrategy()
java.util.List<PairedEndSequenceFileModel>	getPairs()
java.util.List<SingleEndSequenceFileModel>	getSingles()
java.lang.String	getStatus()

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

NcbiBioSampleModel

public NcbiBioSampleModel(NcbiBioSampleFiles bioSample)

Method Detail

getId

public java.lang.String getId()

getBioSample

public java.lang.String getBioSample()

getInstrumentModel

public java.lang.String getInstrumentModel()

getLibraryName

public java.lang.String getLibraryName()

getLibrarySelection

public java.lang.String getLibrarySelection()

getLibrarySource

public java.lang.String getLibrarySource()

getLibraryStrategy

public java.lang.String getLibraryStrategy()

getLibraryConstructionProtocol

public java.lang.String getLibraryConstructionProtocol()

getStatus

public java.lang.String getStatus()

getAccession

public java.lang.String getAccession()

getSingles

public java.util.List<SingleEndSequenceFileModel> getSingles()

getPairs

public java.util.List<PairedEndSequenceFileModel> getPairs()