Package ca.corefacility.bioinformatics.irida.service

Interface Summary

Interface	Description
AnalysisExecutionScheduledTask	A service for executing AnalysisSubmission tasks.
AnalysisService	Service for managing objects of type Analysis.
AnalysisSubmissionCleanupService	A service for cleaning up certain aspects of AnalysisSubmissions.
AnalysisSubmissionService	A service for AnalysisSubmissions.
AnalysisTypesService	A service for managing registered AnalysisTypes.
AnnouncementService
CleanupAnalysisSubmissionCondition	Defines an interface for a condition on whether or not to clean up an AnalysisSubmission.
CRUDService<IdentifierType extends java.io.Serializable,Type extends Timestamped<IdentifierType>>	All Service interfaces should extend this interface to inherit common methods relating to creating, reading, updating and deleting objects from persistence.
EmailController	Interface describing methods for emailing information to the user
GenomeAssemblyService	A service for storing and retrieving GenomeAssembly entities.
IridaClientDetailsService	Service for storing and reading IridaClientDetails objects
ProjectEventEmailScheduledTask	Scheduled task for emailing new ProjectEvents to Users
ProjectEventService	Service for reading and managing ProjectEvents
ProjectService	A specialized service layer for projects.
ProjectSubscriptionService	A specialized service layer for project subscriptions.
ReferenceFileService	Interface for interactions with ReferenceFile.
RemoteAPIService	Service for storing and retrieving RemoteAPIs that this API can connect to
RemoteAPITokenService	Service for saving and reading tokens for Remote APIs
SequencingObjectService	Service for managing SequencingObjects and relationships with related objects
SequencingRunService	Service layer for SequencingRun objects
TaxonomyService	Service for reading taxonomy information

Class Summary

Class	Description
AnalysisSubmissionService.AnalysisServiceStatus	Class to store the number of running and queued analyses
SequencingObjectProcessingService	Service used to run a FileProcessingChain on incoming SequencingObjects.