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Sample Files

Files can be uploaded and attached to samples for analysis

View Sample files

Prerequisites:

  • You must have access to the project either through membership, or through a namespace share
  1. From the left sidebar, select Projects
  2. Select the project
  3. From the left sidebar, select Samples
  4. Select the sample
  5. The table lists all the single-end and paired-end files which have been uploaded to the sample

Upload Files to Samples

Prerequisites:

  • You must have access to the project either through membership, or through a namespace share
  • You must have at least a Maintainer role

To upload files to a sample:

  1. From the left sidebar, select Projects
  2. Select the project
  3. From the left sidebar, select Samples
  4. Select the sample
  5. Select Upload Files
  6. From the dialog, select Choose files
  7. Select the files you would like to upload. Multi file selection is enabled
  8. Select Upload

Concatenate Sample files

Prerequisites:

  • You must have access to the project either through membership, or through a namespace share
  • You must have a Maintainer role
  • Files of the same type (single-end or paired-end) and compression can be concatenated together
  1. From the left sidebar, select Projects
  2. Select the project
  3. From the left sidebar, select Samples
  4. Select the sample
  5. Select the checkboxes for the files you would like to concatenate, and select Concatenate files
  6. In the dialog, the files to be concatenated are listed.
  7. Enter the Filename. This will be the base name of the concatenated files.
  8. Select the checkbox Delete originals if you would like to remove the original files after concatenation
  9. Select Concatenate

Download Sample files

  1. From the left sidebar, select Projects
  2. Select the project
  3. From the left sidebar, select Samples
  4. Select the sample
  5. Click the filename you'd like to download

Delete Sample files

Prerequisites:

  • You must have access to the project either through membership, or through a namespace share
  • You must have an Owner role
  1. From the left sidebar, select Projects
  2. Select the project
  3. From the left sidebar, select Samples
  4. Select the sample
  5. To delete multiple files, select the checkboxes for the files you would like to delete, then click Delete Files
  6. To delete individual single end and paired-end reads, select Delete for the files you would like to delete.