Downloading IRIDA
You can find individual download links, and links to corresponding documentation in the sections below.
IRIDA Web Interface
The IRIDA web interface is distributed as a war archive. You can access the latest stable release of IRIDA at:
https://github.com/phac-nml/irida/releases/latest
You may also see all releases of the IRIDA web interface at:
https://github.com/phac-nml/irida/releases
The documentation for installing and configuring the IRIDA web interface (and Galaxy!) can be found at:
http://irida.corefacility.ca/documentation/administrator/
IRIDA Uploader
The IRIDA Uploader is an application used to submit sequencing data from a variety of sequencers to an instance of IRIDA. You can access the latest stable release of the IRIDA Uploader at:
https://github.com/phac-nml/irida-uploader/releases/latest
The Uploader is available as a stand alone application with user interface, and as a command line utility.
A tutorial for the stand alone application can be found here: https://github.com/phac-nml/irida-uploader-tutorial
The command line utility is available via source code on Github as well as a package on bioconda
The documentation for using the IRIDA Uploader is included in the package, but can also be found at:
https://irida-uploader.readthedocs.io/en/stable/
Sample Data
Sample data for testing IRIDA can be found at:
https://sairidapublic.blob.core.windows.net/downloads/data/irida-sample-data.zip
The sample data package consists of simulated Illumina MiSeq read data for three publicly available Listeria Monocytogenes genomes. You can find more information about the simulated data at:
https://sairidapublic.blob.core.windows.net/downloads/data/README.txt